424 research outputs found

    Ferroelectricity due to orbital ordering in E-type undoped rare-earth manganites

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    Aiming at understanding the origin of the electronic contribution to ferroelectric polarization in undoped manganites, we evaluate the Berry phase of orbital-polarizable Bloch electrons as an orbital ordering (OO) establishes in the background of an antiferromagnetic E-type configuration. The onset of OO is tuned by the Jahn-Teller (JT) interaction in a tight-binding model for interacting electrons moving along zigzag chains. A finite polarization is found as soon as the JT coupling is strong enough to induce OO, supporting the large electronic contribution predicted from first principles.Comment: 4 pages, 2 figures, figure and text substantially improved. Title change

    The best practice for preparation of samples from FTA®cards for diagnosis of blood borne infections using African trypanosomes as a model system

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    Background: Diagnosis of blood borne infectious diseases relies primarily on the detection of the causative agent in the blood sample. Molecular techniques offer sensitive and specific tools for this although considerable difficulties exist when using these approaches in the field environment. In large scale epidemiological studies, FTA®cards are becoming increasingly popular for the rapid collection and archiving of a large number of samples. However, there are some difficulties in the downstream processing of these cards which is essential for the accurate diagnosis of infection. Here we describe recommendations for the best practice approach for sample processing from FTA®cards for the molecular diagnosis of trypanosomiasis using PCR. Results: A comparison of five techniques was made. Detection from directly applied whole blood was less sensitive (35.6%) than whole blood which was subsequently eluted from the cards using Chelex®100 (56.4%). Better apparent sensitivity was achieved when blood was lysed prior to application on the FTA cards (73.3%) although this was not significant. This did not improve with subsequent elution using Chelex®100 (73.3%) and was not significantly different from direct DNA extraction from blood in the field (68.3%). Conclusions: Based on these results, the degree of effort required for each of these techniques and the difficulty of DNA extraction under field conditions, we recommend that blood is transferred onto FTA cards whole followed by elution in Chelex®100 as the best approach

    Seismic input motion determined from a surface-downhole pair of sensors: a constrained deconvolution approach.

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    We apply a deconvolution approach to the problem of determining the input motion at the base of an instrumented borehole using only a pair of recordings, one at the borehole surface and the other at its bottom. To stabilize the bottom-tosurface spectral ratio, we apply an iterative regularization algorithm that allows us to constrain the solution to be positively defined and to have a finite time duration. Through the analysis of synthetic data, we show that the method is capable of retrieving reliable input motion, suppressing the effect of the negative interference generated by the downgoing waves. Results obtained by applying the methodology to weak earthquakes recorded at the Ataköy (Istanbul) vertical array are also presented and show that removing the effect of the downgoing waves is remarkable, even considering the recording at a depth of 140 m

    Characterisation of the Trypanosoma brucei rhodesiense isolates from Tanzania using serum resistance associated gene as molecular marker

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    Serum resistance associated (SRA) gene has been found to confer resistance to the innate trypanolytic factor (TLF) found in normal human serum; thus allowing Trypanosoma brucei brucei to survive exposure to normal human serum. This study was carried out to examine the presence of SRA gene and identify the origin of T. b. rhodesiense isolates from three districts in Tanzania, namely Kibondo, Kasulu and Urambo. Twenty-six T. b. rhodesiense isolates and two references T. b. rhodesiense isolates from Kenya were examined for SRA gene using simple Polymerase Chain Reaction technique. The gene was found to be present in all 26 T. b. rhodesiense isolates including the two references isolates from Kenya. The SRA gene was confirmed to be specific to T. b. rhodesiense since it could not be amplified from all other Trypanozoon including T. b. gambiense; and gave an amplified fragment of the expected size (3.9kb), confirming that all these isolates were T. b. rhodesiense of the northern variant. Although the geographic distributions of T. b. gambiense and T. b. rhodesiense are clearly localized to west/central Africa and eastern Africa, respectively, natural movement of people and recent influx of large number of refugees into Tanzania from the Democratic Republic of Congo, could have brought T. b. gambiense in western Tanzania. The overlap in distribution of both of these pathogenic sub-species could result in erroneous diagnoses since both trypanosome sub-species are morphologically identical, and currently serologic methods have low specificity. Both the susceptible and resistant T.b. rhodesiense isolates possessed the SRA gene suggesting that there is no correlation between drug resistance and presence of SRA gene. The use of SRA gene helps to confirm the identity and diversity of some of the isolates resistant to various drugs. Keywords: Trypanosoma brucei rhodesiense, resistance, SRA gene, PCR, TanzaniaTanzania Health Research Bulletin Vol. 9 (1) 2007: pp.25-3

    Magnetism of mixed quaternary Heusler alloys: (Ni,T)2_{2}MnSn (T=Cu,Pd) as a case study

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    The electronic properties, exchange interactions, finite-temperature magnetism, and transport properties of random quaternary Heusler Ni2_{2}MnSn alloys doped with Cu- and Pd-atoms are studied theoretically by means of {\it ab initio} calculations over the entire range of dopant concentrations. While the magnetic moments are only weakly dependent on the alloy composition, the Curie temperatures exhibit strongly non-linear behavior with respect to Cu-doping in contrast with an almost linear concentration dependence in the case of Pd-doping. The present parameter-free theory agrees qualitatively and also reasonably well quantitatively with the available experimental results. An analysis of exchange interactions is provided for a deeper understanding of the problem. The dopant atoms perturb electronic structure close to the Fermi energy only weakly and the residual resistivity thus obeys a simple Nordheim rule. The dominating contribution to the temperature-dependent resistivity is due to thermodynamical fluctuations originating from the spin-disorder, which, according to our calculations, can be described successfully via the disordered local moments model. Results based on this model agree fairly well with the measured values of spin-disorder induced resistivity.Comment: 13 pages, 13 figure

    Ab-initio electronic and magnetic structure in La_0.66Sr_0.33MnO_3: strain and correlation effects

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    The effects of tetragonal strain on electronic and magnetic properties of strontium-doped lanthanum manganite, La_{2/3}Sr_{1/3}MnO_3 (LSMO), are investigated by means of density-functional methods. As far as the structural properties are concerned, the comparison between theory and experiments for LSMO strained on the most commonly used substrates, shows an overall good agreement: the slight overestimate (at most of 1-1.5 %) for the equilibrium out-of-plane lattice constants points to possible defects in real samples. The inclusion of a Hubbard-like contribution on the Mn d states, according to the so-called "LSDA+U" approach, is rather ineffective from the structural point of view, but much more important from the electronic and magnetic point of view. In particular, full half-metallicity, which is missed within a bare density-functional approach, is recovered within LSDA+U, in agreement with experiments. Moreover, the half-metallic behavior, particularly relevant for spin-injection purposes, is independent on the chosen substrate and is achieved for all the considered in-plane lattice constants. More generally, strain effects are not seen to crucially affect the electronic structure: within the considered tetragonalization range, the minority gap is only slightly (i.e. by about 0.1-0.2 eV) affected by a tensile or compressive strain. Nevertheless, we show that the growth on a smaller in-plane lattice constant can stabilize the out-of-plane vs in-plane e_g orbital and significatively change their relative occupancy. Since e_g orbitals are key quantities for the double-exchange mechanism, strain effects are confirmed to be crucial for the resulting magnetic coupling.Comment: 16 pages, 7 figures, to be published on J. Phys.: Condensed Matte

    Balanced electron-hole transport in spin-orbit semimetal SrIrO3 heterostructures

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    Relating the band structure of correlated semimetals to their transport properties is a complex and often open issue. The partial occupation of numerous electron and hole bands can result in properties that are seemingly in contrast with one another, complicating the extraction of the transport coefficients of different bands. The 5d oxide SrIrO3 hosts parabolic bands of heavy holes and light electrons in gapped Dirac cones due to the interplay between electron-electron interactions and spin-orbit coupling. We present a multifold approach relying on different experimental techniques and theoretical calculations to disentangle its complex electronic properties. By combining magnetotransport and thermoelectric measurements in a field-effect geometry with first-principles calculations, we quantitatively determine the transport coefficients of different conduction channels. Despite their different dispersion relationships, electrons and holes are found to have strikingly similar transport coefficients, yielding a holelike response under field-effect and thermoelectric measurements and a linear, electronlike Hall effect up to 33 T.Comment: 5 pages, 4 figure

    Interpretation of microtremor 2D array data using Rayleigh and Love waves: the case study of Bevagna (central Italy)

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    In the last decades, geophysicists and seismologists have focused their attention on the inversion of empirical surface-waves’ dispersion curves from microtremor measurements for estimating the Swaves velocity structure at a site. This procedure allows a fast and convenient investigation without strong active sources, which are difficult to deploy especially in urban areas. In this study we report on a 2D seismic noise array experiment carried out at Bevagna (Central Italy) near the station BVG of the Italian Accelerometric Network (RAN). The site was investigated within the DPC-INGV S4 Project (2007-2009). The Rayleigh- and Love- waves dispersion characteristics were estimated using different methods. The inversion of the dispersion curves was then performed independently, obtaining two estimations for the S-waves velocity profiles. The results of cross-hole logging near the seismic station are used for a comparison. The shear waves velocity profiles estimated by microtremor analyses range up to 150m depth. The two independent procedures provide consistent shear waves velocity profiles for the shallow part of the model (20-30 m in depth) in agreement with the results of the cross-hole logging. Some problems arise between 30 and 40 m in depth in the profile estimated by surface waves. In this range cross-hole logging evidences an inversion of S-waves velocity. Although the cross-hole logging stops at 40 m of depth, we are confident about the results provided by the Rayleigh-waves analysis below 40-50 m. This case study suggests that greater efforts should be devoted to exploit the potential of a coupled analysis of Rayleigh and Love waves from microtremor array measurements
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